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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807419.1_cds_XP_016494828.1_9207
CDS Infomation

[gene=LOC107814019] [db_xref=GeneID:107814019] [protein=probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic] [frame=2] [partial=5'] [protein_id=XP_016494828.1] [location=complement(join(6616..6843,9695..9877,13261..13389,16107..16308,24158..24279,24762..24935,37713..37844,37928..38017,38090..>38228))] [gbkey=CDS]
Sequence

CTAGCTCAGATCTTTCTTTTTGCTGCTAAAGGTTTTACGATTCAGGATATTCTTGGTCCA
AGGATAATTTCCTTGAAGGATTGTATGTGGTCAACTTATATGTTTCTGCATGAATCATTG
CTAGATAACAGCTTACAAAAAGCATATTTTAGATTTAGGACGAGGAGAATAAAGCTAAAG
AAGAAGGCAGGTGTTGATCCAATCAGTACTGCTTTTGATCAGATGAAGAGGGTGAAGAAT
CCCCCTATACGTTTGAATGACTTTGCAAGCATTGATTCTATGAGAGAAGAAATTAATGAA
GTCGTAGCATTTTTGCAAAACCCTCGTGCTTTTCAAGAAATGGGAGCTCGCGCCCCTCGG
GGAGTTCTTATTGTAGGGGAGAGAGGAACTGGAAAGACATCCCTAGCACTAGCAATTGCA
GCAGAAGCTAAGGTGCCTCTTGTTGAAGTTAAAGCCCAGCAGTTAGAGGCTGGTTTATGG
GTTGGCCAAAGTGCATCAAATGTTAGAGAGCTGTTTCAAACAGCACGTGATCTGGCCCCT
GTAATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTCAGAGGGAAGTTTATCCAC
ACTAAAAAGCAGGACCATGAAGCCTTCATCAATCAACTCTTGGTGGAACTTGATGGGTTT
GAAAAACAGGATGGTGTGGTCTTGATGGCTACTACTAGAAATCTCAAGCAAATCGATGAG
GCGTTGCAACGCCCTGGTCGGATGGATAGGATATTCCGTCTTCAGCGGCCTACTCAAGCA
GAAAGAGAAAAGATACTTACGATAGCTGCAAAAGGAACTATGGATGAAGAACTTATAGAT
TTTGTAGATTGGAGAAAGGTCGCAGAGAAAACAGCTCTTTTGCGTCCAAGTGAACTAAAA
CTTGTTCCCGTGGCCTTGGAAGGTAGTGCCTTTCGAAGCAAATTCCTGGACATAGATGAG
CTTATGACCTACTGCAGCTGGTTTGCGACCTTCAGCAGCCTTGTCCCGAAATGGTTAAGG
AAGACCAAAGCTGTAAAGCAATTAAGCAGAATGCTGGTGAATCATCTTGGATTGACATTA
ACGAAAGAGGATCTAGAAAATGTTGTTGATCTGATGGAGCCTTATGGTCAAATAAGCAAT
GGAATCGAATTGCTAAATCCACCTCTTGATTGGACAATGGAAACAAAGTTTCCGCATGCT
GTTTGGGCTGCCGGTCGGAGTTTAATTGCTCTTCTTCTACCAAACTTCGATATTGTGGAT
AATCTGTGGCTCGAGCCTTTCTCGTGGGAGGTACCATATTCTGTTTCTTCGTTAGAAGTA
GCTTTTTTAAAGTATGATTGTAGTTATATCTTTGTCATTTTTCTTAAAAGAGAAAGCAAG
AGAAACTTATCGGACTGA

Peptide Sequence

PEP ID

XP_016494828.1
PEP Infomation

PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic, partial [Nicotiana tabacum]
Sequence

LAQIFLFAAKGFTIQDILGPRIISLKDCMWSTYMFLHESLLDNSLQKAYFRFRTRRIKLK
KKAGVDPISTAFDQMKRVKNPPIRLNDFASIDSMREEINEVVAFLQNPRAFQEMGARAPR
GVLIVGERGTGKTSLALAIAAEAKVPLVEVKAQQLEAGLWVGQSASNVRELFQTARDLAP
VIIFVEDFDLFAGVRGKFIHTKKQDHEAFINQLLVELDGFEKQDGVVLMATTRNLKQIDE
ALQRPGRMDRIFRLQRPTQAEREKILTIAAKGTMDEELIDFVDWRKVAEKTALLRPSELK
LVPVALEGSAFRSKFLDIDELMTYCSWFATFSSLVPKWLRKTKAVKQLSRMLVNHLGLTL
TKEDLENVVDLMEPYGQISNGIELLNPPLDWTMETKFPHAVWAAGRSLIALLLPNFDIVD
NLWLEPFSWEVPYSVSSLEVAFLKYDCSYIFVIFLKRESKRNLSD

Transcript Sequence

Gene sequence data has not been registered.